CDS

Accession Number TCMCG017C10946
gbkey CDS
Protein Id OMP00371.1
Location join(30431..30454,30611..30703,30779..30862,30947..31150,31495..31737,31821..33377,33464..34006,34143..34394,34683..35321)
GeneID InterPro:IPR000330
Organism Corchorus olitorius
locus_tag COLO4_12730

Protein

Length 1212aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01014941.1
Definition SNF2-related protein [Corchorus olitorius]
Locus_tag COLO4_12730

EGGNOG-MAPPER Annotation

COG_category BK
Description ATP-dependent helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11647        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04714        [VIEW IN KEGG]
ko05225        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
map05225        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010199        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043044        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048859        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060147        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060964        [VIEW IN EMBL-EBI]
GO:0060966        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070920        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:0090691        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1900034        [VIEW IN EMBL-EBI]
GO:1900036        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903798        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTCTTGGGAAGACTGTACAGGTTATGGCATTGATTGCTTATTTGATGGAATTTAAAGGAAACTATGGTCCACATCTTATAATTGTTCCCAATGCTGTTTTGGTAAATTGGAAGAGTGAGTTACATACTTGGCTGCCTTCTGTTTCATGCATCTATTATGTTGGTGGAAAAGATCAACGCTCAAAGTTATTTTCTCAAGAGGTCATGGCAATGAAATTTAATGTCCTTGTGACAACTTATGAGTTCATTATGTACGACCGGTCAAAACTCTCCAAAATTGATTGGAAGTACATCATAATTGATGAAGCACAGAGAATGAAAGACAGGGAATCTGTTTTAGCTCGTGATCTTGATAGGTATCGCTGTCAACGGCGTTTGCTCCTCACTGGGACACCATTACAGAATGACTTGAAAGAGCTCTGGTCACTGTTAAATCTTCTCCTTCCTGAAGTGTTTGATAATCGCAAGGCATTTCATGATTGGTTTTCACAACCATTTCAAAAGGAAGTCCCTGCGCATAATGCAGAGGATGATTGGCTTGAGACTGAAAAGAAGGTCATCATCATCCACCGGCTTCATCAAATTCTAGAGCCTTTTATGCTCAGACGTCGTGTTGAAGATGTAGAAGGTTCATTGCCTCCAAAGGTCTCGATAGTTTTGAGATGCAGAATGTCAGCTATTCAGAGTGCCATTTATGACTGGATAAAATCAACTGGGACTCTCCGAGTTGATCCTGAAGATGAGAAGCGCAGGGCTCAAAAAAACCCGAATTACCAGGCTAAGGTGTACAAAACTTTAAATAACCGGTGTATGGAGCTTCGGAAGACTTGCAATCATCCTTTGCTTAATTACCCGTATTACAACGACTTCTCCAAAGATTTCCTTGTGAGATCTTGTGGGAAATTGTGGATTCTAGACAGGATCCTCATAAAACTACAGAGAACTGGGCATCGTGTTTTGCTTTTTAGTACCATGACAAAGCTCTTGGATATCTTGGAGGAATACCTGCAGTGGAGGAGGCTTGTGTACAGACGTATTGATGGAACAACGAGCTTGGAAGATCGTGAATCAGCTATTGTTGACTTCAATAGCCCTAACTCTGACTGCTTCATTTTCTTACTAAGTATTCGTGCTGCTGGGCGTGGTCTAAATCTTCAATCTGCTGATACTGTTGTTATATATGATCCTGATCCGAACCCTAAAAATGAGGAGCAGGCGGTTGCTAGAGCTCATCGAATTGGACAGAAAAGGGAAGTCAAAGTCATTTACATGGAAGCAGTTGTTGACAAAATCTCCAGTCATCAGAAGGAGGATGAACTGAGGAGTGGAGGTACAGTCGATTTTGAGGATGATTTTGCAGGTAAGGATCGATACATGGGATCTATTGAAAGCCTCATAAGGAATAACATTCAACAGTATAAAATAGATATGGCTGACGAAGTAATCAATGCTGGACGCTTTGACCAGAGAACAACGCATGAAGAGAGACGCATGACTTTAGAAACATTATTGCATGATGAAGAGAGGTATCAAGACACTGTCCATGATGTTCCCTCATTGCACGAGGTAAATCGCATGATAGCAAGAAGTGAGGAAGAAGTTGAGTTATTTGATCAAATGGATGAAGAATTTGATTGGAGTGAGGAGATGACTAGTCATGAACATGTACCAAAGTGGCTTAGAGCCAGTACACGAGAAGTGAATACTGCCATTGCTACTTTATCGAAAAAGCCATCAAAGAACATTTTATGGACTGCTGATGTTGGTGCTGAATCTAATGAAATGGAGACTGAGAGGAAAAGGGGGCGACCCAAGGGGAAAAAACATCCTAATTATAAGGAAATCGATGATGATAATGAAGAATACTCTGAAGCAAGTTCTGATGAGAGAAATGGTTACTCTGGGAATGAGGAAGAGGGAGAAATTGGAGAATTTGAAGATGATGAATTTAGTGGTGCTGTTGAAGCACCACCTAGAAATAAGGATCAGTCAGAAGAAGATGGCCCACTTTGTGATGGTGGCTATGAGTATCCCCAGGCTTCAGAAAACATCCGAAATAATCATATGCTCGAAGAAGGTGGTTCTTCAGGATCATCACTGGACAGTCGCAGACAAACGCAGATGGTGTCTCCTGTTTCTCCTCAGAAATTTGGATCTCTCTCTGCATTGGATGCTAGGCCTGGTTCTGTTGCAAGAAGGCTGCCAGATGAACTAGAGGAAGGTGAGATTGCGGTATCCACAGATTCTCACATGGACCACCAGCAATCTGAAAGTTGGATTCATGAACGCGATGAAGGTGAGGATGAACAAGTTGTCCAACCCAAGATAAAACGAAAGCGTAGTATTCGGGTTCGACCTCGTCCTAATATGGAAAGGGCAGAGGAGAAATCTGTCAATGAAGTGCCTCAGCGTGGAGATTCGTCTTTGTTGCCCTTCCAAGTAGACCAAAGATACCAATCCCAATTAAAGGCTGATTCTGAAGCAAAACCAACCCGTGAGCGCAATGCTTTCAAGCATGATCCAAATGATTCATCTTCAAAAATTAGGAGGAACTTACCTACAAGAAAGATAGCTAATGCATCAAAGTTGCATGCATCATCTCCAAAGTCTGGTAGAGTGAATTCCATGTCGGCTCCTGCGGAAGATGCTGGTGAACCATCCAGAGAGAGTTGGGACAGTAAAGTGGCTAATACAAGTGGGTCTTCAAATTTTGGTGCTAAGATGTCTGATGTTATCCAAAGAAAGTGCAAAAATGTGATTAGCAAGCTTCAGAGGAGAATAGATAAGGAAGGTCAACAAATAGTACCACTTTTGACAGATTTGTGGAAGAGGATTGAAAACTCTGGTTACATGGGTGGAAGTGGAAGTAGTCATTTGGATCTACGAAAGATTGATCAGCGTGTTGAGAGACTAGAGTACAGTGGAGTGATGGAGCTTGTTTCAGATGTGCAACTGGTTTTAAAAAGTGCAATGAATTATTATGGGTTTTCACATGAGGTTAGATCTGAAGCGAGAAAGGTACACGATCTGTTTTTCGACTTGTTGAAGATTGCCTTTCCAGATACAGATTTCCGTGAAGCCAGAAATGCTCTATCTTTCGCTAGCCCAGTATCTACCTCCGCAGCAGCTCCATCCTCTAGGCAGGTAGCTGCTGGCAAGAGGCAAAAGCCAATAAATGATGTAGAATCTGATTTTGGCGTTACTCAAAAGTCATTGCAGCGTGGATCCAATCATGCTGGTGAAGATGGAAGGGTTAGAGGGCATGCGCCCCAAAAGGAATCGAGGCTTGGGAGCGGAACCAGGGAGCAGTATCAACAGGATGATTCTCCTTTAACTCATCCAGGGGAGCTGGTTATTTGCAAGAAGAAGAGGAAAGACAGGGAGAAGTCTGTAGTGAAACCTAGGACTGGTACATCTGGACCTGTTTCACCCCCAAGCATGGGTCGTAGCATCAGGAGCCCGGCGACAGGATCTGTCTCTAAGGATGCAAGACAGAGCCAGCAAAACACCCATCAGCAAAGTTGGCCCAACCAGCCTGCTCATCCATCAAATGGTGGCGGTGGGAGTGTTGGTTGGGCCAATCCTGTGAAGAAGTTGAGAACAGACGCAGGTAAAAGAAGGCCGAGCCATTTATGA
Protein:  
MGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGGKDQRSKLFSQEVMAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEVPAHNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKSTGTLRVDPEDEKRRAQKNPNYQAKVYKTLNNRCMELRKTCNHPLLNYPYYNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPNSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDFEDDFAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQDTVHDVPSLHEVNRMIARSEEEVELFDQMDEEFDWSEEMTSHEHVPKWLRASTREVNTAIATLSKKPSKNILWTADVGAESNEMETERKRGRPKGKKHPNYKEIDDDNEEYSEASSDERNGYSGNEEEGEIGEFEDDEFSGAVEAPPRNKDQSEEDGPLCDGGYEYPQASENIRNNHMLEEGGSSGSSLDSRRQTQMVSPVSPQKFGSLSALDARPGSVARRLPDELEEGEIAVSTDSHMDHQQSESWIHERDEGEDEQVVQPKIKRKRSIRVRPRPNMERAEEKSVNEVPQRGDSSLLPFQVDQRYQSQLKADSEAKPTRERNAFKHDPNDSSSKIRRNLPTRKIANASKLHASSPKSGRVNSMSAPAEDAGEPSRESWDSKVANTSGSSNFGAKMSDVIQRKCKNVISKLQRRIDKEGQQIVPLLTDLWKRIENSGYMGGSGSSHLDLRKIDQRVERLEYSGVMELVSDVQLVLKSAMNYYGFSHEVRSEARKVHDLFFDLLKIAFPDTDFREARNALSFASPVSTSAAAPSSRQVAAGKRQKPINDVESDFGVTQKSLQRGSNHAGEDGRVRGHAPQKESRLGSGTREQYQQDDSPLTHPGELVICKKKRKDREKSVVKPRTGTSGPVSPPSMGRSIRSPATGSVSKDARQSQQNTHQQSWPNQPAHPSNGGGGSVGWANPVKKLRTDAGKRRPSHL